Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW41088.1 | SCW46400.1 | SAMN02927924_00521 | SAMN02927924_00709 | TonB-dependent Receptor Plug Domain. | TonB-dependent Receptor Plug Domain. | 0.580 |
SCW41088.1 | SCW46448.1 | SAMN02927924_00521 | SAMN02927924_00712 | TonB-dependent Receptor Plug Domain. | Dipeptidyl-peptidase-4. | 0.603 |
SCW41088.1 | SCW47737.1 | SAMN02927924_00521 | SAMN02927924_00797 | TonB-dependent Receptor Plug Domain. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.678 |
SCW41088.1 | SCW53701.1 | SAMN02927924_00521 | SAMN02927924_01159 | TonB-dependent Receptor Plug Domain. | Iron complex outermembrane recepter protein. | 0.647 |
SCW41088.1 | SCW79999.1 | SAMN02927924_00521 | SAMN02927924_02955 | TonB-dependent Receptor Plug Domain. | TonB-dependent Receptor Plug Domain. | 0.675 |
SCW41088.1 | SCW80018.1 | SAMN02927924_00521 | SAMN02927924_02957 | TonB-dependent Receptor Plug Domain. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.615 |
SCW41088.1 | SCW92111.1 | SAMN02927924_00521 | SAMN02927924_04125 | TonB-dependent Receptor Plug Domain. | TonB-dependent receptor. | 0.600 |
SCW46400.1 | SCW41088.1 | SAMN02927924_00709 | SAMN02927924_00521 | TonB-dependent Receptor Plug Domain. | TonB-dependent Receptor Plug Domain. | 0.580 |
SCW46400.1 | SCW46448.1 | SAMN02927924_00709 | SAMN02927924_00712 | TonB-dependent Receptor Plug Domain. | Dipeptidyl-peptidase-4. | 0.611 |
SCW46400.1 | SCW47737.1 | SAMN02927924_00709 | SAMN02927924_00797 | TonB-dependent Receptor Plug Domain. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.670 |
SCW46400.1 | SCW53701.1 | SAMN02927924_00709 | SAMN02927924_01159 | TonB-dependent Receptor Plug Domain. | Iron complex outermembrane recepter protein. | 0.796 |
SCW46400.1 | SCW80018.1 | SAMN02927924_00709 | SAMN02927924_02957 | TonB-dependent Receptor Plug Domain. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.613 |
SCW46400.1 | SCW92111.1 | SAMN02927924_00709 | SAMN02927924_04125 | TonB-dependent Receptor Plug Domain. | TonB-dependent receptor. | 0.770 |
SCW46448.1 | SCW41088.1 | SAMN02927924_00712 | SAMN02927924_00521 | Dipeptidyl-peptidase-4. | TonB-dependent Receptor Plug Domain. | 0.603 |
SCW46448.1 | SCW46400.1 | SAMN02927924_00712 | SAMN02927924_00709 | Dipeptidyl-peptidase-4. | TonB-dependent Receptor Plug Domain. | 0.611 |
SCW46448.1 | SCW47737.1 | SAMN02927924_00712 | SAMN02927924_00797 | Dipeptidyl-peptidase-4. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.613 |
SCW46448.1 | SCW53701.1 | SAMN02927924_00712 | SAMN02927924_01159 | Dipeptidyl-peptidase-4. | Iron complex outermembrane recepter protein. | 0.581 |
SCW46448.1 | SCW79999.1 | SAMN02927924_00712 | SAMN02927924_02955 | Dipeptidyl-peptidase-4. | TonB-dependent Receptor Plug Domain. | 0.662 |
SCW46448.1 | SCW80018.1 | SAMN02927924_00712 | SAMN02927924_02957 | Dipeptidyl-peptidase-4. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.726 |
SCW46448.1 | SCW92111.1 | SAMN02927924_00712 | SAMN02927924_04125 | Dipeptidyl-peptidase-4. | TonB-dependent receptor. | 0.622 |
page 1 of 4