Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW33805.1 | SCW53713.1 | SAMN02927924_00027 | SAMN02927924_01160 | 2-deoxy-D-gluconate 3-dehydrogenase. | Arylsulfatase A. | 0.733 |
SCW33805.1 | SCW53735.1 | SAMN02927924_00027 | SAMN02927924_01162 | 2-deoxy-D-gluconate 3-dehydrogenase. | Arylsulfatase. | 0.733 |
SCW33805.1 | rpsD | SAMN02927924_00027 | SAMN02927924_00796 | 2-deoxy-D-gluconate 3-dehydrogenase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW34329.1 | SCW53713.1 | SAMN02927924_00064 | SAMN02927924_01160 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Arylsulfatase A. | 0.733 |
SCW34329.1 | SCW53735.1 | SAMN02927924_00064 | SAMN02927924_01162 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Arylsulfatase. | 0.733 |
SCW34329.1 | rpsD | SAMN02927924_00064 | SAMN02927924_00796 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW38029.1 | SCW53713.1 | SAMN02927924_00310 | SAMN02927924_01160 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | Arylsulfatase A. | 0.733 |
SCW38029.1 | SCW53735.1 | SAMN02927924_00310 | SAMN02927924_01162 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | Arylsulfatase. | 0.733 |
SCW38029.1 | rpsD | SAMN02927924_00310 | SAMN02927924_00796 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW38068.1 | SCW53713.1 | SAMN02927924_00313 | SAMN02927924_01160 | 3(or 17)beta-hydroxysteroid dehydrogenase. | Arylsulfatase A. | 0.733 |
SCW38068.1 | SCW53735.1 | SAMN02927924_00313 | SAMN02927924_01162 | 3(or 17)beta-hydroxysteroid dehydrogenase. | Arylsulfatase. | 0.733 |
SCW38068.1 | rpsD | SAMN02927924_00313 | SAMN02927924_00796 | 3(or 17)beta-hydroxysteroid dehydrogenase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW38337.1 | SCW53713.1 | SAMN02927924_00332 | SAMN02927924_01160 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Arylsulfatase A. | 0.733 |
SCW38337.1 | SCW53735.1 | SAMN02927924_00332 | SAMN02927924_01162 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Arylsulfatase. | 0.733 |
SCW38337.1 | rpsD | SAMN02927924_00332 | SAMN02927924_00796 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW38522.1 | SCW53713.1 | SAMN02927924_00344 | SAMN02927924_01160 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | Arylsulfatase A. | 0.733 |
SCW38522.1 | SCW53735.1 | SAMN02927924_00344 | SAMN02927924_01162 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | Arylsulfatase. | 0.733 |
SCW38522.1 | rpsD | SAMN02927924_00344 | SAMN02927924_00796 | 3alpha(or 20beta)-hydroxysteroid dehydrogenase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.418 |
SCW53713.1 | SCW33805.1 | SAMN02927924_01160 | SAMN02927924_00027 | Arylsulfatase A. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.733 |
SCW53713.1 | SCW34329.1 | SAMN02927924_01160 | SAMN02927924_00064 | Arylsulfatase A. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.733 |
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