Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW54268.1 | SCW54281.1 | SAMN02927924_01208 | SAMN02927924_01209 | Glycosyl transferases group 1. | Histidine triad (HIT) family protein. | 0.624 |
SCW54268.1 | SCW54292.1 | SAMN02927924_01208 | SAMN02927924_01210 | Glycosyl transferases group 1. | 3-oxoacid CoA-transferase subunit B. | 0.609 |
SCW54268.1 | SCW54305.1 | SAMN02927924_01208 | SAMN02927924_01211 | Glycosyl transferases group 1. | 3-oxoacid CoA-transferase subunit A. | 0.609 |
SCW54281.1 | SCW54268.1 | SAMN02927924_01209 | SAMN02927924_01208 | Histidine triad (HIT) family protein. | Glycosyl transferases group 1. | 0.624 |
SCW54281.1 | SCW54292.1 | SAMN02927924_01209 | SAMN02927924_01210 | Histidine triad (HIT) family protein. | 3-oxoacid CoA-transferase subunit B. | 0.780 |
SCW54281.1 | SCW54305.1 | SAMN02927924_01209 | SAMN02927924_01211 | Histidine triad (HIT) family protein. | 3-oxoacid CoA-transferase subunit A. | 0.768 |
SCW54281.1 | SCW76205.1 | SAMN02927924_01209 | SAMN02927924_02672 | Histidine triad (HIT) family protein. | Z1 domain-containing protein. | 0.563 |
SCW54281.1 | SCW86656.1 | SAMN02927924_01209 | SAMN02927924_03504 | Histidine triad (HIT) family protein. | SNF2 family N-terminal domain-containing protein. | 0.668 |
SCW54281.1 | cysC | SAMN02927924_01209 | SAMN02927924_01510 | Histidine triad (HIT) family protein. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.679 |
SCW54281.1 | rpoA | SAMN02927924_01209 | SAMN02927924_01228 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.606 |
SCW54281.1 | rpoB | SAMN02927924_01209 | SAMN02927924_02144 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.557 |
SCW54281.1 | rpoC | SAMN02927924_01209 | SAMN02927924_02143 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.612 |
SCW54281.1 | rpoZ | SAMN02927924_01209 | SAMN02927924_01154 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.565 |
SCW54292.1 | SCW54268.1 | SAMN02927924_01210 | SAMN02927924_01208 | 3-oxoacid CoA-transferase subunit B. | Glycosyl transferases group 1. | 0.609 |
SCW54292.1 | SCW54281.1 | SAMN02927924_01210 | SAMN02927924_01209 | 3-oxoacid CoA-transferase subunit B. | Histidine triad (HIT) family protein. | 0.780 |
SCW54292.1 | SCW54305.1 | SAMN02927924_01210 | SAMN02927924_01211 | 3-oxoacid CoA-transferase subunit B. | 3-oxoacid CoA-transferase subunit A. | 0.999 |
SCW54305.1 | SCW54268.1 | SAMN02927924_01211 | SAMN02927924_01208 | 3-oxoacid CoA-transferase subunit A. | Glycosyl transferases group 1. | 0.609 |
SCW54305.1 | SCW54281.1 | SAMN02927924_01211 | SAMN02927924_01209 | 3-oxoacid CoA-transferase subunit A. | Histidine triad (HIT) family protein. | 0.768 |
SCW54305.1 | SCW54292.1 | SAMN02927924_01211 | SAMN02927924_01210 | 3-oxoacid CoA-transferase subunit A. | 3-oxoacid CoA-transferase subunit B. | 0.999 |
SCW76205.1 | SCW54281.1 | SAMN02927924_02672 | SAMN02927924_01209 | Z1 domain-containing protein. | Histidine triad (HIT) family protein. | 0.563 |
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