STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW60061.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (257 aa)    
Predicted Functional Partners:
SCW53515.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.842
SCW62110.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.832
SCW86679.1
DNA repair exonuclease SbcCD nuclease subunit.
    
  0.821
SCW92960.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.803
SCW68440.1
NADH dehydrogenase subunit M.
    
  0.799
SCW72196.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
 
  0.799
SCW80295.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.789
SCW35170.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
  
  0.786
SCW49584.1
Hypothetical protein.
    
  0.784
SCW62610.1
Ankyrin repeat.
    
  0.784
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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