Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW62620.1 | SCW62633.1 | SAMN02927924_01759 | SAMN02927924_01760 | Hypothetical protein. | Cell Wall Hydrolase. | 0.712 |
SCW62620.1 | SCW62644.1 | SAMN02927924_01759 | SAMN02927924_01761 | Hypothetical protein. | Hypothetical protein. | 0.596 |
SCW62620.1 | SCW62656.1 | SAMN02927924_01759 | SAMN02927924_01762 | Hypothetical protein. | Uncharacterized domain 1-containing protein. | 0.596 |
SCW62620.1 | SCW62668.1 | SAMN02927924_01759 | SAMN02927924_01763 | Hypothetical protein. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.596 |
SCW62620.1 | SCW62723.1 | SAMN02927924_01759 | SAMN02927924_01768 | Hypothetical protein. | Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.450 |
SCW62620.1 | coaE | SAMN02927924_01759 | SAMN02927924_01766 | Hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.478 |
SCW62620.1 | dnaQ | SAMN02927924_01759 | SAMN02927924_01765 | Hypothetical protein. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.480 |
SCW62620.1 | hpf | SAMN02927924_01759 | SAMN02927924_01764 | Hypothetical protein. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.626 |
SCW62633.1 | SCW62620.1 | SAMN02927924_01760 | SAMN02927924_01759 | Cell Wall Hydrolase. | Hypothetical protein. | 0.712 |
SCW62633.1 | SCW62644.1 | SAMN02927924_01760 | SAMN02927924_01761 | Cell Wall Hydrolase. | Hypothetical protein. | 0.715 |
SCW62633.1 | SCW62656.1 | SAMN02927924_01760 | SAMN02927924_01762 | Cell Wall Hydrolase. | Uncharacterized domain 1-containing protein. | 0.610 |
SCW62633.1 | SCW62668.1 | SAMN02927924_01760 | SAMN02927924_01763 | Cell Wall Hydrolase. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.646 |
SCW62633.1 | coaE | SAMN02927924_01760 | SAMN02927924_01766 | Cell Wall Hydrolase. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.525 |
SCW62633.1 | dnaQ | SAMN02927924_01760 | SAMN02927924_01765 | Cell Wall Hydrolase. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.539 |
SCW62633.1 | hpf | SAMN02927924_01760 | SAMN02927924_01764 | Cell Wall Hydrolase. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.666 |
SCW62644.1 | SCW62620.1 | SAMN02927924_01761 | SAMN02927924_01759 | Hypothetical protein. | Hypothetical protein. | 0.596 |
SCW62644.1 | SCW62633.1 | SAMN02927924_01761 | SAMN02927924_01760 | Hypothetical protein. | Cell Wall Hydrolase. | 0.715 |
SCW62644.1 | SCW62656.1 | SAMN02927924_01761 | SAMN02927924_01762 | Hypothetical protein. | Uncharacterized domain 1-containing protein. | 0.881 |
SCW62644.1 | SCW62668.1 | SAMN02927924_01761 | SAMN02927924_01763 | Hypothetical protein. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.884 |
SCW62644.1 | SCW62723.1 | SAMN02927924_01761 | SAMN02927924_01768 | Hypothetical protein. | Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.599 |
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