STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW66594.1DNA-binding transcriptional regulator, GntR family. (247 aa)    
Predicted Functional Partners:
SCW60883.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SCW94397.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.732
SCW95680.1
Transcriptional regulator, IclR family.
  
    0.599
SCW60254.1
Transcriptional regulator, IclR family.
  
    0.553
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
 
 
   0.537
SCW90647.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.512
SCW91322.1
Acetolactate synthase, small subunit.
   
    0.424
SCW66606.1
Hypothetical protein.
       0.403
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.