STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW71854.1Acyl-CoA dehydrogenase. (395 aa)    
Predicted Functional Partners:
SCW71841.1
Acyl-CoA dehydrogenase.
     0.948
SCW90592.1
Acyl-CoA dehydrogenase.
 
     0.936
SCW47355.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.847
SCW60155.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.844
SCW46302.1
Acyl-CoA dehydrogenase.
     0.822
SCW34301.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.807
SCW45413.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.807
SCW60391.1
Acyl-CoA dehydrogenase.
     0.799
SCW38552.1
Acyl-CoA dehydrogenase.
     0.786
SCW40017.1
Aminomethyltransferase.
  
 0.779
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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