STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72404.1Membrane protein involved in the export of O-antigen and teichoic acid. (444 aa)    
Predicted Functional Partners:
SCW72397.1
Hypothetical protein.
 
  
 0.908
SCW88041.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.811
SCW54112.1
UDP-galactopyranose mutase.
  
  
 0.768
SCW35875.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
  
 
 0.698
SCW37291.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.695
SCW47821.1
GTP:adenosylcobinamide-phosphate guanylyltransferase.
 
     0.687
SCW37308.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
 
    0.659
SCW37362.1
GTP:adenosylcobinamide-phosphate guanylyltransferase.
 
   
 0.657
SCW39950.1
Hypothetical protein.
 
     0.619
SCW36011.1
UDP-glucose dehydrogenase.
  
  
 0.615
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.