Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW45807.1 | SCW73835.1 | SAMN02927924_00668 | SAMN02927924_02507 | PAP2 superfamily protein. | TrkA-C domain-containing protein. | 0.423 |
SCW73835.1 | SCW45807.1 | SAMN02927924_02507 | SAMN02927924_00668 | TrkA-C domain-containing protein. | PAP2 superfamily protein. | 0.423 |
SCW73835.1 | SCW74528.1 | SAMN02927924_02507 | SAMN02927924_02585 | TrkA-C domain-containing protein. | Multicomponent K+:H+ antiporter subunit A. | 0.524 |
SCW73835.1 | SCW90210.1 | SAMN02927924_02507 | SAMN02927924_03867 | TrkA-C domain-containing protein. | Undecaprenyl-diphosphatase. | 0.423 |
SCW73835.1 | SCW92105.1 | SAMN02927924_02507 | SAMN02927924_04124 | TrkA-C domain-containing protein. | Phosphoinositide phospholipase C, Ca2+-dependent. | 0.423 |
SCW73835.1 | aroC | SAMN02927924_02507 | SAMN02927924_02508 | TrkA-C domain-containing protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.417 |
SCW74528.1 | SCW73835.1 | SAMN02927924_02585 | SAMN02927924_02507 | Multicomponent K+:H+ antiporter subunit A. | TrkA-C domain-containing protein. | 0.524 |
SCW90210.1 | SCW73835.1 | SAMN02927924_03867 | SAMN02927924_02507 | Undecaprenyl-diphosphatase. | TrkA-C domain-containing protein. | 0.423 |
SCW92105.1 | SCW73835.1 | SAMN02927924_04124 | SAMN02927924_02507 | Phosphoinositide phospholipase C, Ca2+-dependent. | TrkA-C domain-containing protein. | 0.423 |
aroC | SCW73835.1 | SAMN02927924_02508 | SAMN02927924_02507 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | TrkA-C domain-containing protein. | 0.417 |