STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW80521.1Protein of unknown function. (137 aa)    
Predicted Functional Partners:
SCW80528.1
Protein of unknown function.
 
    0.932
SCW94167.1
Putative transcriptional regulator.
 
  
 0.779
SCW95321.1
Putative transcriptional regulator.
 
  
 0.697
SCW33591.1
mRNA interferase HigB.
    
 0.688
SCW77724.1
mRNA interferase RelE/StbE.
    
 0.684
SCW94181.1
DNA-damage-inducible protein J.
 
  
 0.673
SCW94175.1
mRNA interferase YafQ.
    
 0.662
SCW93376.1
Toxin YhaV.
    
 0.640
SCW80514.1
Glutathione S-transferase.
       0.601
SCW91602.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
  
 0.594
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.