STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW82705.1General secretion pathway protein F. (405 aa)    
Predicted Functional Partners:
SCW82715.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.999
SCW82696.1
General secretion pathway protein G.
 
  
 0.994
SCW82723.1
General secretion pathway protein D.
 
  
 0.981
SCW82678.1
General secretion pathway protein I.
 
  
 0.980
SCW82629.1
Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.975
SCW82733.1
General secretion pathway protein C.
 
  
 0.959
SCW82660.1
General secretion pathway protein K.
 
   
 0.949
SCW82667.1
General secretion pathway protein J.
 
  
 0.943
SCW82653.1
General secretion pathway protein L.
 
  
 0.891
SCW82686.1
General secretion pathway protein H.
 
  
 0.879
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.