STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW83008.1Antirestriction protein ArdC. (320 aa)    
Predicted Functional Partners:
SCW83018.1
Protein of unknown function.
     0.914
SCW93702.1
Hypothetical protein.
  
     0.704
SCW82990.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
 
     0.566
SCW83028.1
Chromosome partitioning protein, ParB family.
 
     0.565
SCW82998.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
 
     0.561
SCW82956.1
DNA polymerase-3 subunit epsilon.
       0.441
SCW82967.1
Hypothetical protein.
       0.441
SCW82979.1
SIR2-like domain-containing protein.
       0.441
SCW56795.1
Putative DNA primase/helicase.
      0.408
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.