STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW89537.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
SCW89544.1
Doubled CXXCH motif (Paired_CXXCH_1).
 
     0.949
SCW89530.1
Ferredoxin-NADP reductase.
 
     0.931
SCW89554.1
Uncharacterized membrane protein.
 
     0.832
SCW77756.1
Putative phage tail protein.
  
     0.691
SCW94150.1
Protein of unknown function.
  
     0.667
SCW84718.1
Glycosyl transferase family 21.
  
     0.652
SCW89559.1
Hypothetical protein.
 
     0.624
SCW77056.1
Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family.
  
     0.618
SCW73146.1
DNA-binding transcriptional regulator, CsgD family.
  
     0.589
SCW84760.1
Hypothetical protein.
  
     0.586
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.