Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW44861.1 | SCW90979.1 | SAMN02927924_00602 | SAMN02927924_03942 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.426 |
SCW44861.1 | SCW90994.1 | SAMN02927924_00602 | SAMN02927924_03945 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine phosphorylase. | 0.913 |
SCW44861.1 | surE | SAMN02927924_00602 | SAMN02927924_00199 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.942 |
SCW86869.1 | SCW90979.1 | SAMN02927924_03527 | SAMN02927924_03942 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.732 |
SCW86869.1 | SCW90994.1 | SAMN02927924_03527 | SAMN02927924_03945 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Thymidine phosphorylase. | 0.843 |
SCW86869.1 | SCW91006.1 | SAMN02927924_03527 | SAMN02927924_03947 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Phosphoketolase. | 0.661 |
SCW86869.1 | SCW91011.1 | SAMN02927924_03527 | SAMN02927924_03948 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.664 |
SCW90979.1 | SCW44861.1 | SAMN02927924_03942 | SAMN02927924_00602 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.426 |
SCW90979.1 | SCW86869.1 | SAMN02927924_03942 | SAMN02927924_03527 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.732 |
SCW90979.1 | SCW90984.1 | SAMN02927924_03942 | SAMN02927924_03943 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Cytosine deaminase. | 0.563 |
SCW90979.1 | SCW90994.1 | SAMN02927924_03942 | SAMN02927924_03945 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Thymidine phosphorylase. | 0.765 |
SCW90979.1 | SCW91000.1 | SAMN02927924_03942 | SAMN02927924_03946 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Metallo-beta-lactamase family protein. | 0.492 |
SCW90979.1 | SCW91006.1 | SAMN02927924_03942 | SAMN02927924_03947 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Phosphoketolase. | 0.707 |
SCW90979.1 | SCW91011.1 | SAMN02927924_03942 | SAMN02927924_03948 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.795 |
SCW90979.1 | SCW91017.1 | SAMN02927924_03942 | SAMN02927924_03949 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Cu2+-exporting ATPase. | 0.493 |
SCW90979.1 | SCW91023.1 | SAMN02927924_03942 | SAMN02927924_03950 | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | 0.620 |
SCW90984.1 | SCW90979.1 | SAMN02927924_03943 | SAMN02927924_03942 | Cytosine deaminase. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.563 |
SCW90984.1 | SCW90994.1 | SAMN02927924_03943 | SAMN02927924_03945 | Cytosine deaminase. | Thymidine phosphorylase. | 0.831 |
SCW90984.1 | SCW91000.1 | SAMN02927924_03943 | SAMN02927924_03946 | Cytosine deaminase. | Metallo-beta-lactamase family protein. | 0.499 |
SCW90984.1 | SCW91006.1 | SAMN02927924_03943 | SAMN02927924_03947 | Cytosine deaminase. | Phosphoketolase. | 0.478 |
page 1 of 4