STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW94539.1Outer membrane protein, cobalt-zinc-cadmium efflux system. (427 aa)    
Predicted Functional Partners:
SCW94543.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system.
 
  0.988
SCW90864.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system.
 
  0.950
SCW88972.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.891
SCW85785.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.888
SCW89017.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system.
 
 0.888
SCW89404.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.888
SCW94583.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system.
 
 0.888
SCW83562.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.885
SCW45724.1
Putative ABC transport system permease protein.
  
 0.834
SCW48657.1
Membrane fusion protein, multidrug efflux system.
  
 0.829
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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