STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW95721.1Site-specific DNA recombinase. (197 aa)    
Predicted Functional Partners:
SCW95324.1
Site-specific DNA recombinase.
  
     0.766
SCW95102.1
Site-specific DNA recombinase.
  
     0.764
SCW54842.1
Site-specific DNA recombinase.
  
     0.763
SCW95717.1
Protein of unknown function.
 
     0.697
SCW49896.1
Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.499
SCW56201.1
Mu-like prophage protein gpG.
   
    0.424
SCW91263.1
Hypothetical protein.
   
    0.424
SCW96156.1
Transposase and inactivated derivatives, TnpA family.
 
     0.403
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.