STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG18868.1Protein of unknown function. (406 aa)    
Predicted Functional Partners:
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.891
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.770
SHG18851.1
ATP-binding cassette, subfamily F, uup.
       0.725
SHG20226.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.719
SHG18831.1
Hypothetical protein.
       0.718
SHG18812.1
Hypothetical protein.
       0.685
SHG91840.1
FecR family protein.
  
     0.683
SHG18889.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.588
SHG18791.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.520
SHG72446.1
FecR family protein.
  
     0.514
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.