STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG19865.1Protein of unknown function. (355 aa)    
Predicted Functional Partners:
SHG24333.1
Protein of unknown function.
  
     0.547
SHH08275.1
Protein of unknown function.
  
     0.514
SHG67613.1
Aspartyl protease.
  
     0.497
SHG24596.1
Hypothetical protein.
  
     0.490
SHG46597.1
Gliding motility associated protien GldN.
  
     0.487
SHG18156.1
pRiA4b ORF-3-like protein.
  
     0.485
SHG19880.1
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
       0.478
SHG19895.1
Protein involved in gliding motility GldI.
       0.478
SHG19912.1
Phosphoesterase RecJ domain-containing protein.
       0.478
SHH02162.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.