STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG20323.1propionyl-CoA carboxylase beta chain. (513 aa)    
Predicted Functional Partners:
SHG20304.1
propionyl-CoA carboxylase alpha chain.
 0.998
SHG20292.1
Biotin-requiring enzyme.
 
 0.995
SHG57011.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.993
SHG57253.1
methylmalonyl-CoA epimerase.
 
 
  0.941
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.913
SHG22858.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.911
SHG22839.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.822
SHG99918.1
Manually curated.
 
 
 0.807
SHG20226.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
 
  
 0.795
SHG66399.1
Acyl-coenzyme A oxidase.
  
 
 0.795
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.