STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG22764.1Trehalose 6-phosphate synthase /trehalose 6-phosphatase. (737 aa)    
Predicted Functional Partners:
SHG22777.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.989
SHG31172.1
Alpha,alpha-trehalase.
 
 0.972
SHG73245.1
Trehalase.
  
 0.949
SHG49789.1
Glycosidase.
  
 0.881
SHG82727.1
Glycogen recognition site of AMP-activated protein kinase.
  
 0.881
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.881
SHG48069.1
Trehalose and maltose hydrolase (possible phosphorylase).
  
 0.874
SHG49806.1
Maltose phosphorylase.
  
 0.874
SHG96694.1
LysM domain-containing protein.
   
  
 0.864
SHG21685.1
Organic hydroperoxide reductase OsmC/OhrA.
   
    0.859
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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