STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG23900.1Haem-binding domain-containing protein. (157 aa)    
Predicted Functional Partners:
SHG58842.1
Hypothetical protein.
  
 
 0.614
SHG70694.1
Hypothetical protein.
  
 
 0.614
SHG99775.1
Hypothetical protein.
  
 
 0.614
SHG23888.1
Hypothetical protein.
       0.565
SHG23871.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.473
SHG68406.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.466
SHG58611.1
Outer membrane protein OmpA.
  
   0.461
SHG71400.1
WD40-like Beta Propeller Repeat.
  
   0.461
SHG66574.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
  
 0.419
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (16%) [HD]