Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG23871.1 | SHG23888.1 | SAMN04488116_0473 | SAMN04488116_0474 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Hypothetical protein. | 0.657 |
SHG23871.1 | SHG23900.1 | SAMN04488116_0473 | SAMN04488116_0475 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Haem-binding domain-containing protein. | 0.473 |
SHG23871.1 | SHG58611.1 | SAMN04488116_0473 | SAMN04488116_1892 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Outer membrane protein OmpA. | 0.654 |
SHG23871.1 | SHG71400.1 | SAMN04488116_0473 | SAMN04488116_2224 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | WD40-like Beta Propeller Repeat. | 0.654 |
SHG23888.1 | SHG23871.1 | SAMN04488116_0474 | SAMN04488116_0473 | Hypothetical protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.657 |
SHG23888.1 | SHG23900.1 | SAMN04488116_0474 | SAMN04488116_0475 | Hypothetical protein. | Haem-binding domain-containing protein. | 0.565 |
SHG23900.1 | SHG23871.1 | SAMN04488116_0475 | SAMN04488116_0473 | Haem-binding domain-containing protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.473 |
SHG23900.1 | SHG23888.1 | SAMN04488116_0475 | SAMN04488116_0474 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.565 |
SHG23900.1 | SHG58611.1 | SAMN04488116_0475 | SAMN04488116_1892 | Haem-binding domain-containing protein. | Outer membrane protein OmpA. | 0.461 |
SHG23900.1 | SHG58842.1 | SAMN04488116_0475 | SAMN04488116_1903 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.614 |
SHG23900.1 | SHG66574.1 | SAMN04488116_0475 | SAMN04488116_2003 | Haem-binding domain-containing protein. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.419 |
SHG23900.1 | SHG68406.1 | SAMN04488116_0475 | SAMN04488116_2084 | Haem-binding domain-containing protein. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.466 |
SHG23900.1 | SHG70694.1 | SAMN04488116_0475 | SAMN04488116_2193 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.614 |
SHG23900.1 | SHG71400.1 | SAMN04488116_0475 | SAMN04488116_2224 | Haem-binding domain-containing protein. | WD40-like Beta Propeller Repeat. | 0.461 |
SHG23900.1 | SHG99775.1 | SAMN04488116_0475 | SAMN04488116_3167 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.614 |
SHG58611.1 | SHG23871.1 | SAMN04488116_1892 | SAMN04488116_0473 | Outer membrane protein OmpA. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.654 |
SHG58611.1 | SHG23900.1 | SAMN04488116_1892 | SAMN04488116_0475 | Outer membrane protein OmpA. | Haem-binding domain-containing protein. | 0.461 |
SHG58611.1 | SHG58842.1 | SAMN04488116_1892 | SAMN04488116_1903 | Outer membrane protein OmpA. | Hypothetical protein. | 0.480 |
SHG58611.1 | SHG68406.1 | SAMN04488116_1892 | SAMN04488116_2084 | Outer membrane protein OmpA. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.662 |
SHG58611.1 | SHG70694.1 | SAMN04488116_1892 | SAMN04488116_2193 | Outer membrane protein OmpA. | Hypothetical protein. | 0.405 |
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