Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG24675.1 | SHG24685.1 | SAMN04488116_0528 | SAMN04488116_0529 | EamA-like transporter family protein. | Putative hydrolase of the HAD superfamily. | 0.834 |
SHG24675.1 | SHG24702.1 | SAMN04488116_0528 | SAMN04488116_0530 | EamA-like transporter family protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.827 |
SHG24675.1 | SHG24711.1 | SAMN04488116_0528 | SAMN04488116_0531 | EamA-like transporter family protein. | Putative acetyltransferase. | 0.609 |
SHG24675.1 | SHG24738.1 | SAMN04488116_0528 | SAMN04488116_0533 | EamA-like transporter family protein. | Hypothetical protein; Belongs to the LOG family. | 0.561 |
SHG24675.1 | SHG24766.1 | SAMN04488116_0528 | SAMN04488116_0535 | EamA-like transporter family protein. | Peptidase family M23. | 0.561 |
SHG24675.1 | SHG24781.1 | SAMN04488116_0528 | SAMN04488116_0536 | EamA-like transporter family protein. | Hypothetical protein. | 0.477 |
SHG24675.1 | SHG24795.1 | SAMN04488116_0528 | SAMN04488116_0537 | EamA-like transporter family protein. | Hypothetical protein. | 0.477 |
SHG24675.1 | SHG24808.1 | SAMN04488116_0528 | SAMN04488116_0538 | EamA-like transporter family protein. | Hypothetical protein; Manually curated. | 0.477 |
SHG24675.1 | ligA | SAMN04488116_0528 | SAMN04488116_0534 | EamA-like transporter family protein. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.570 |
SHG24675.1 | prmC | SAMN04488116_0528 | SAMN04488116_0532 | EamA-like transporter family protein. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.609 |
SHG24685.1 | SHG24675.1 | SAMN04488116_0529 | SAMN04488116_0528 | Putative hydrolase of the HAD superfamily. | EamA-like transporter family protein. | 0.834 |
SHG24685.1 | SHG24702.1 | SAMN04488116_0529 | SAMN04488116_0530 | Putative hydrolase of the HAD superfamily. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.961 |
SHG24685.1 | SHG24711.1 | SAMN04488116_0529 | SAMN04488116_0531 | Putative hydrolase of the HAD superfamily. | Putative acetyltransferase. | 0.605 |
SHG24685.1 | SHG24738.1 | SAMN04488116_0529 | SAMN04488116_0533 | Putative hydrolase of the HAD superfamily. | Hypothetical protein; Belongs to the LOG family. | 0.641 |
SHG24685.1 | SHG24766.1 | SAMN04488116_0529 | SAMN04488116_0535 | Putative hydrolase of the HAD superfamily. | Peptidase family M23. | 0.616 |
SHG24685.1 | SHG24781.1 | SAMN04488116_0529 | SAMN04488116_0536 | Putative hydrolase of the HAD superfamily. | Hypothetical protein. | 0.477 |
SHG24685.1 | SHG24795.1 | SAMN04488116_0529 | SAMN04488116_0537 | Putative hydrolase of the HAD superfamily. | Hypothetical protein. | 0.477 |
SHG24685.1 | SHG24808.1 | SAMN04488116_0529 | SAMN04488116_0538 | Putative hydrolase of the HAD superfamily. | Hypothetical protein; Manually curated. | 0.477 |
SHG24685.1 | ligA | SAMN04488116_0529 | SAMN04488116_0534 | Putative hydrolase of the HAD superfamily. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.573 |
SHG24685.1 | prmC | SAMN04488116_0529 | SAMN04488116_0532 | Putative hydrolase of the HAD superfamily. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.607 |
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