STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG25562.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SHG52067.1
Hypothetical protein.
  
     0.746
SHG91926.1
Hypothetical protein.
  
     0.729
SHG27830.1
Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains.
  
     0.676
SHG52187.1
Hypothetical protein.
  
     0.661
SHG46422.1
Outer membrane protein TolC.
  
     0.568
SHG46467.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
     0.538
SHG72818.1
PAP2 superfamily protein.
  
     0.522
SHG16934.1
Hypothetical protein.
  
     0.494
SHG72388.1
Putative phosphoesterase.
  
     0.480
SHG25579.1
Fasciclin domain-containing protein.
       0.475
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.