STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG28457.1WD40-like Beta Propeller Repeat. (306 aa)    
Predicted Functional Partners:
SHG28474.1
Hypothetical protein.
       0.773
SHH01076.1
WD40-like Beta Propeller Repeat.
 
 
0.710
SHG81559.1
OmpA family protein.
  
   0.617
SHG25868.1
WD40-like Beta Propeller Repeat.
  
  
0.561
SHG71426.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.549
SHG36681.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.525
SHG71400.1
WD40-like Beta Propeller Repeat.
  
  
0.513
SHG58611.1
Outer membrane protein OmpA.
  
  
0.512
SHG28493.1
Uncharacterized conserved protein YbaA, DUF1428 family.
       0.511
SHH02082.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.507
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.