STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG29887.1Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (372 aa)    
Predicted Functional Partners:
SHG90648.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
 0.994
SHH03579.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.933
SHG67724.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.882
SHG90406.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.861
SHG91269.1
Aldose 1-epimerase.
  
 0.773
SHG90954.1
Beta-galactosidase.
 
  
 0.557
SHG35031.1
Hypothetical protein.
  
 0.547
SHG99604.1
Predicted dehydrogenase.
  
   0.465
SHG29911.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.424
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.