Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG32940.1 | SHG32963.1 | SAMN04488116_0984 | SAMN04488116_0985 | Helix-turn-helix. | Hypothetical protein. | 0.741 |
SHG32940.1 | SHG32972.1 | SAMN04488116_0984 | SAMN04488116_0986 | Helix-turn-helix. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.672 |
SHG32963.1 | SHG32940.1 | SAMN04488116_0985 | SAMN04488116_0984 | Hypothetical protein. | Helix-turn-helix. | 0.741 |
SHG32963.1 | SHG32972.1 | SAMN04488116_0985 | SAMN04488116_0986 | Hypothetical protein. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.799 |
SHG32972.1 | SHG32940.1 | SAMN04488116_0986 | SAMN04488116_0984 | Membrane protein TerC, possibly involved in tellurium resistance. | Helix-turn-helix. | 0.672 |
SHG32972.1 | SHG32963.1 | SAMN04488116_0986 | SAMN04488116_0985 | Membrane protein TerC, possibly involved in tellurium resistance. | Hypothetical protein. | 0.799 |
SHG32972.1 | SHG47584.1 | SAMN04488116_0986 | SAMN04488116_1374 | Membrane protein TerC, possibly involved in tellurium resistance. | Hemolysin, contains CBS domains. | 0.431 |
SHG32972.1 | SHG52228.1 | SAMN04488116_0986 | SAMN04488116_1588 | Membrane protein TerC, possibly involved in tellurium resistance. | Protein involved in gliding motility GldE. | 0.900 |
SHG32972.1 | SHG82138.1 | SAMN04488116_0986 | SAMN04488116_2556 | Membrane protein TerC, possibly involved in tellurium resistance. | Protease-4. | 0.668 |
SHG47584.1 | SHG32972.1 | SAMN04488116_1374 | SAMN04488116_0986 | Hemolysin, contains CBS domains. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.431 |
SHG52228.1 | SHG32972.1 | SAMN04488116_1588 | SAMN04488116_0986 | Protein involved in gliding motility GldE. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.900 |
SHG82138.1 | SHG32972.1 | SAMN04488116_2556 | SAMN04488116_0986 | Protease-4. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.668 |