STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG33242.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SHH08066.1
Hypothetical protein.
  
     0.667
SHG33266.1
Hypothetical protein.
 
     0.624
SHG33220.1
Protein of unknown function.
       0.621
SHH05066.1
Hypothetical protein.
  
     0.594
SHG76013.1
Hypothetical protein.
  
     0.588
SHG19895.1
Protein involved in gliding motility GldI.
  
     0.576
SHG46858.1
Hypothetical protein.
  
     0.554
SHH05586.1
Hypothetical protein.
  
     0.543
SHG96809.1
Hypothetical protein.
  
     0.519
SHG27703.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.