STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG33564.1Glucose-fructose oxidoreductase. (378 aa)    
Predicted Functional Partners:
SHH03010.1
Oxidoreductase family, C-terminal alpha/beta domain.
  
     0.675
SHG33584.1
Carboxypeptidase C (cathepsin A).
       0.530
SHG33601.1
Hypothetical protein.
       0.530
SHG33620.1
Chloramphenicol O-acetyltransferase type A.
       0.520
SHG99627.1
Galactokinase; Belongs to the GHMP kinase family.
  
   0.461
SHG67745.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.450
SHG54700.1
Sugar phosphate isomerase/epimerase.
  
    0.444
SHG48315.1
Sugar phosphate isomerase/epimerase.
  
    0.402
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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