STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG34040.1Protein of unknown function. (86 aa)    
Predicted Functional Partners:
SHG33993.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.771
SHG34027.1
Membrane protein YfhO.
       0.748
SHG34015.1
Hypothetical protein.
       0.739
SHG34069.1
Putative MetA-pathway of phenol degradation.
 
     0.651
SHH02181.1
Protein of unknown function.
  
     0.650
SHG50664.1
Protein of unknown function.
  
     0.611
SHG59124.1
Hypothetical protein.
  
     0.606
SHH00670.1
DNA uptake protein ComE.
  
     0.602
SHG55419.1
Hypothetical protein.
  
     0.555
SHG67674.1
Hypothetical protein.
  
     0.529
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.