STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG35262.1Sugar phosphate isomerase/epimerase. (269 aa)    
Predicted Functional Partners:
SHG35280.1
Phytanoyl-CoA dioxygenase (PhyH).
 
     0.822
SHG70641.1
Uncharacterized membrane protein.
 
     0.680
SHG82946.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
 
     0.563
SHG95578.1
Hypothetical protein.
  
     0.563
SHG35310.1
AraC-type DNA-binding protein.
       0.561
SHG35293.1
Hypothetical protein.
       0.556
SHG19679.1
Hypothetical protein.
  
     0.512
SHG46742.1
Uncharacterized conserved protein.
  
     0.488
SHG52918.1
Predicted dehydrogenase.
  
    0.454
SHG70694.1
Hypothetical protein.
  
     0.449
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.