STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG44642.1Phenylalanine-4-hydroxylase. (588 aa)    
Predicted Functional Partners:
SHG97277.1
4a-hydroxytetrahydrobiopterin dehydratase.
  
 0.987
SHG66990.1
Homogentisate 1,2-dioxygenase.
 
  
 0.877
SHG84463.1
Prephenate dehydratase.
     
 0.856
SHG86470.1
Aspartate aminotransferase.
   
 
 0.854
SHG99435.1
Aspartate aminotransferase.
   
 
 0.854
SHG84539.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
     
 0.841
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.744
SHG67058.1
Histidinol-phosphate aminotransferase.
     
 0.744
SHG66971.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.736
SHG22798.1
L-2,4-diaminobutyrate decarboxylase.
   
 0.724
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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