STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG45416.1Alpha-galactosidase. (589 aa)    
Predicted Functional Partners:
SHG96435.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.867
SHG47897.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.755
SHG90406.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
  0.718
SHH03579.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
  0.718
SHG90954.1
Beta-galactosidase.
 
 
 0.711
SHG30144.1
Alpha-galactosidase.
    
  0.700
SHG45395.1
Transcriptional regulator, GntR family.
 
  
  0.677
SHG90739.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.660
SHG48633.1
Acid phosphatase (class A).
  
     0.605
SHH07642.1
Hypothetical protein.
  
     0.591
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.