Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG22839.1 | SHG47517.1 | SAMN04488116_0408 | SAMN04488116_1371 | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.906 |
SHG22839.1 | SHG97677.1 | SAMN04488116_0408 | SAMN04488116_3111 | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.874 |
SHG30824.1 | SHG47517.1 | SAMN04488116_0879 | SAMN04488116_1371 | ATPase family associated with various cellular activities (AAA). | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.483 |
SHG47464.1 | SHG47486.1 | SAMN04488116_1369 | SAMN04488116_1370 | Proton-dependent oligopeptide transporter, POT family. | Dipeptidyl-peptidase-4. | 0.817 |
SHG47464.1 | SHG47517.1 | SAMN04488116_1369 | SAMN04488116_1371 | Proton-dependent oligopeptide transporter, POT family. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.519 |
SHG47464.1 | SHG47536.1 | SAMN04488116_1369 | SAMN04488116_1372 | Proton-dependent oligopeptide transporter, POT family. | Mevalonate kinase. | 0.551 |
SHG47486.1 | SHG47464.1 | SAMN04488116_1370 | SAMN04488116_1369 | Dipeptidyl-peptidase-4. | Proton-dependent oligopeptide transporter, POT family. | 0.817 |
SHG47486.1 | SHG47517.1 | SAMN04488116_1370 | SAMN04488116_1371 | Dipeptidyl-peptidase-4. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.538 |
SHG47486.1 | SHG47536.1 | SAMN04488116_1370 | SAMN04488116_1372 | Dipeptidyl-peptidase-4. | Mevalonate kinase. | 0.532 |
SHG47517.1 | SHG22839.1 | SAMN04488116_1371 | SAMN04488116_0408 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.906 |
SHG47517.1 | SHG30824.1 | SAMN04488116_1371 | SAMN04488116_0879 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | ATPase family associated with various cellular activities (AAA). | 0.483 |
SHG47517.1 | SHG47464.1 | SAMN04488116_1371 | SAMN04488116_1369 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Proton-dependent oligopeptide transporter, POT family. | 0.519 |
SHG47517.1 | SHG47486.1 | SAMN04488116_1371 | SAMN04488116_1370 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Dipeptidyl-peptidase-4. | 0.538 |
SHG47517.1 | SHG47536.1 | SAMN04488116_1371 | SAMN04488116_1372 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Mevalonate kinase. | 0.970 |
SHG47517.1 | SHG49589.1 | SAMN04488116_1371 | SAMN04488116_1463 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Mevalonate kinase. | 0.972 |
SHG47517.1 | SHG49619.1 | SAMN04488116_1371 | SAMN04488116_1464 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Diphosphomevalonate decarboxylase. | 0.903 |
SHG47517.1 | SHG97677.1 | SAMN04488116_1371 | SAMN04488116_3111 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.917 |
SHG47517.1 | kmo | SAMN04488116_1371 | SAMN04488116_1308 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.717 |
SHG47517.1 | menA | SAMN04488116_1371 | SAMN04488116_1076 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.845 |
SHG47536.1 | SHG47464.1 | SAMN04488116_1372 | SAMN04488116_1369 | Mevalonate kinase. | Proton-dependent oligopeptide transporter, POT family. | 0.551 |
page 1 of 2