STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG48961.1Transferase 2, rSAM/selenodomain-associated. (235 aa)    
Predicted Functional Partners:
SHG48870.1
Hypothetical protein.
     0.991
SHG48942.1
Protein of unknown function, DUF547.
 
     0.931
SHG59330.1
Hypothetical protein.
  
     0.771
SHG59292.1
Radical SAM/Cys-rich domain-containing protein.
 
     0.720
SHG48847.1
Rhodanese-related sulfurtransferase.
 
     0.711
SHG48912.1
Methyltransferase domain-containing protein.
 
    0.688
SHG48896.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.656
SHG22764.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
 
 0.625
SHG49075.1
Protein of unknown function, DUF547.
  
     0.607
SHG48825.1
Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family.
       0.470
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.