STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG49572.14-hydroxybenzoate polyprenyltransferase. (301 aa)    
Predicted Functional Partners:
SHG84750.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.878
SHG49589.1
Mevalonate kinase.
 
   
 0.853
SHG28096.1
FAD/FMN-containing dehydrogenase.
    
 0.781
SHG49548.1
Nitrilase.
       0.777
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.776
SHG86356.1
Probable protein-translocating porin PorT (TC 1.B.44.1.1).
 
     0.674
SHG49525.1
23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.644
SHG66749.1
Protein of unknown function.
  
    0.630
SHG84413.1
Protein of unknown function; Manually curated.
  
    0.619
SHG84952.1
Gliding motility-associated lipoprotein GldB.
  
     0.607
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.