STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG50287.1Thioredoxin reductase (NADPH). (352 aa)    
Predicted Functional Partners:
SHG50265.1
Ferredoxin, 2Fe-2S.
 
 
 
 0.971
SHH06420.1
Glutamate synthase (ferredoxin).
    
 0.833
SHG21699.1
Thioredoxin reductase (NADPH).
  
  
 
0.759
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.748
SHG82700.1
Selenocysteine lyase/Cysteine desulfurase.
   
 
  0.735
SHG66574.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
     
 0.704
SHG50109.1
Selenocysteine lyase/Cysteine desulfurase.
   
 
  0.663
SHH07163.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.663
SHG66773.1
Thioredoxin 1.
  
 0.652
SHG70368.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.652
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.