Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG45235.1 | SHG51925.1 | SAMN04488116_1272 | SAMN04488116_1573 | PAP2 superfamily protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.505 |
SHG47897.1 | SHG51925.1 | SAMN04488116_1387 | SAMN04488116_1573 | Glyoxylase, beta-lactamase superfamily II. | Outer membrane receptor proteins, mostly Fe transport. | 0.526 |
SHG49959.1 | SHG51925.1 | SAMN04488116_1480 | SAMN04488116_1573 | PAP2 superfamily protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.545 |
SHG51882.1 | SHG51900.1 | SAMN04488116_1571 | SAMN04488116_1572 | Two component transcriptional regulator, LytTR family. | Histidine kinase. | 0.960 |
SHG51882.1 | SHG51925.1 | SAMN04488116_1571 | SAMN04488116_1573 | Two component transcriptional regulator, LytTR family. | Outer membrane receptor proteins, mostly Fe transport. | 0.549 |
SHG51882.1 | SHG51941.1 | SAMN04488116_1571 | SAMN04488116_1574 | Two component transcriptional regulator, LytTR family. | Hypothetical protein. | 0.476 |
SHG51900.1 | SHG51882.1 | SAMN04488116_1572 | SAMN04488116_1571 | Histidine kinase. | Two component transcriptional regulator, LytTR family. | 0.960 |
SHG51900.1 | SHG51925.1 | SAMN04488116_1572 | SAMN04488116_1573 | Histidine kinase. | Outer membrane receptor proteins, mostly Fe transport. | 0.560 |
SHG51900.1 | SHG51941.1 | SAMN04488116_1572 | SAMN04488116_1574 | Histidine kinase. | Hypothetical protein. | 0.476 |
SHG51925.1 | SHG45235.1 | SAMN04488116_1573 | SAMN04488116_1272 | Outer membrane receptor proteins, mostly Fe transport. | PAP2 superfamily protein. | 0.505 |
SHG51925.1 | SHG47897.1 | SAMN04488116_1573 | SAMN04488116_1387 | Outer membrane receptor proteins, mostly Fe transport. | Glyoxylase, beta-lactamase superfamily II. | 0.526 |
SHG51925.1 | SHG49959.1 | SAMN04488116_1573 | SAMN04488116_1480 | Outer membrane receptor proteins, mostly Fe transport. | PAP2 superfamily protein. | 0.545 |
SHG51925.1 | SHG51882.1 | SAMN04488116_1573 | SAMN04488116_1571 | Outer membrane receptor proteins, mostly Fe transport. | Two component transcriptional regulator, LytTR family. | 0.549 |
SHG51925.1 | SHG51900.1 | SAMN04488116_1573 | SAMN04488116_1572 | Outer membrane receptor proteins, mostly Fe transport. | Histidine kinase. | 0.560 |
SHG51925.1 | SHG51941.1 | SAMN04488116_1573 | SAMN04488116_1574 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.746 |
SHG51925.1 | SHG51964.1 | SAMN04488116_1573 | SAMN04488116_1575 | Outer membrane receptor proteins, mostly Fe transport. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.579 |
SHG51925.1 | SHG66103.1 | SAMN04488116_1573 | SAMN04488116_1982 | Outer membrane receptor proteins, mostly Fe transport. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.539 |
SHG51925.1 | SHG68124.1 | SAMN04488116_1573 | SAMN04488116_2072 | Outer membrane receptor proteins, mostly Fe transport. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.552 |
SHG51925.1 | SHG83531.1 | SAMN04488116_1573 | SAMN04488116_2614 | Outer membrane receptor proteins, mostly Fe transport. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.565 |
SHG51941.1 | SHG51882.1 | SAMN04488116_1574 | SAMN04488116_1571 | Hypothetical protein. | Two component transcriptional regulator, LytTR family. | 0.476 |
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