Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG49789.1 | SHG51449.1 | SAMN04488116_1472 | SAMN04488116_1550 | Glycosidase. | Oligo-1,6-glucosidase. | 0.416 |
SHG49789.1 | SHG52694.1 | SAMN04488116_1472 | SAMN04488116_1611 | Glycosidase. | Starch synthase. | 0.691 |
SHG49789.1 | SHG82727.1 | SAMN04488116_1472 | SAMN04488116_2581 | Glycosidase. | Glycogen recognition site of AMP-activated protein kinase. | 0.483 |
SHG49789.1 | SHG92242.1 | SAMN04488116_1472 | SAMN04488116_2945 | Glycosidase. | Starch synthase. | 0.691 |
SHG51449.1 | SHG49789.1 | SAMN04488116_1550 | SAMN04488116_1472 | Oligo-1,6-glucosidase. | Glycosidase. | 0.416 |
SHG51449.1 | SHG52694.1 | SAMN04488116_1550 | SAMN04488116_1611 | Oligo-1,6-glucosidase. | Starch synthase. | 0.669 |
SHG51449.1 | SHG82727.1 | SAMN04488116_1550 | SAMN04488116_2581 | Oligo-1,6-glucosidase. | Glycogen recognition site of AMP-activated protein kinase. | 0.413 |
SHG51449.1 | SHG92242.1 | SAMN04488116_1550 | SAMN04488116_2945 | Oligo-1,6-glucosidase. | Starch synthase. | 0.552 |
SHG51449.1 | glgB | SAMN04488116_1550 | SAMN04488116_3053 | Oligo-1,6-glucosidase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.779 |
SHG52679.1 | SHG52694.1 | SAMN04488116_1610 | SAMN04488116_1611 | Protein of unknown function. | Starch synthase. | 0.810 |
SHG52679.1 | glmS | SAMN04488116_1610 | SAMN04488116_1609 | Protein of unknown function. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.601 |
SHG52679.1 | panC | SAMN04488116_1610 | SAMN04488116_1612 | Protein of unknown function. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.635 |
SHG52679.1 | panD | SAMN04488116_1610 | SAMN04488116_1613 | Protein of unknown function. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.593 |
SHG52694.1 | SHG49789.1 | SAMN04488116_1611 | SAMN04488116_1472 | Starch synthase. | Glycosidase. | 0.691 |
SHG52694.1 | SHG51449.1 | SAMN04488116_1611 | SAMN04488116_1550 | Starch synthase. | Oligo-1,6-glucosidase. | 0.669 |
SHG52694.1 | SHG52679.1 | SAMN04488116_1611 | SAMN04488116_1610 | Starch synthase. | Protein of unknown function. | 0.810 |
SHG52694.1 | SHG82727.1 | SAMN04488116_1611 | SAMN04488116_2581 | Starch synthase. | Glycogen recognition site of AMP-activated protein kinase. | 0.691 |
SHG52694.1 | SHG92242.1 | SAMN04488116_1611 | SAMN04488116_2945 | Starch synthase. | Starch synthase. | 0.961 |
SHG52694.1 | SHG97188.1 | SAMN04488116_1611 | SAMN04488116_3087 | Starch synthase. | Alcohol dehydrogenase, class IV. | 0.616 |
SHG52694.1 | glgB | SAMN04488116_1611 | SAMN04488116_3053 | Starch synthase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.984 |
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