STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG57602.1NAD(P)H-dependent FMN reductase. (179 aa)    
Predicted Functional Partners:
SHG57621.1
Ketosteroid isomerase-related protein.
      0.843
SHG57643.1
Acetyltransferase (GNAT) family protein.
       0.752
SHG57665.1
Hypothetical protein.
       0.721
SHG28955.1
Hypothetical protein; Manually curated.
  
 
  0.582
SHG57580.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.563
SHG57686.1
Predicted membrane protein.
       0.492
SHG57705.1
Protein of unknown function.
       0.492
SHG57730.1
Uncharacterized membrane-anchored protein.
       0.492
SHG57561.1
Hypothetical protein.
       0.446
SHG57748.1
Imidazolonepropionase.
       0.427
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.