Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG56752.1 | SHG65671.1 | SAMN04488116_1801 | SAMN04488116_1962 | Putative ABC transport system ATP-binding protein. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.571 |
SHG56752.1 | SHG65690.1 | SAMN04488116_1801 | SAMN04488116_1963 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.982 |
SHG56752.1 | SHG65715.1 | SAMN04488116_1801 | SAMN04488116_1964 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.982 |
SHG56752.1 | SHG65756.1 | SAMN04488116_1801 | SAMN04488116_1966 | Putative ABC transport system ATP-binding protein. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.570 |
SHG56975.1 | SHG65671.1 | SAMN04488116_1813 | SAMN04488116_1962 | ABC-type lipoprotein export system, ATPase component. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.572 |
SHG56975.1 | SHG65690.1 | SAMN04488116_1813 | SAMN04488116_1963 | ABC-type lipoprotein export system, ATPase component. | Putative ABC transport system permease protein. | 0.981 |
SHG56975.1 | SHG65715.1 | SAMN04488116_1813 | SAMN04488116_1964 | ABC-type lipoprotein export system, ATPase component. | Putative ABC transport system permease protein. | 0.981 |
SHG56975.1 | SHG65756.1 | SAMN04488116_1813 | SAMN04488116_1966 | ABC-type lipoprotein export system, ATPase component. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.578 |
SHG65653.1 | SHG65671.1 | SAMN04488116_1961 | SAMN04488116_1962 | Outer membrane protein. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.878 |
SHG65653.1 | SHG65690.1 | SAMN04488116_1961 | SAMN04488116_1963 | Outer membrane protein. | Putative ABC transport system permease protein. | 0.767 |
SHG65653.1 | SHG65715.1 | SAMN04488116_1961 | SAMN04488116_1964 | Outer membrane protein. | Putative ABC transport system permease protein. | 0.754 |
SHG65653.1 | SHG65731.1 | SAMN04488116_1961 | SAMN04488116_1965 | Outer membrane protein. | Putative ABC transport system ATP-binding protein. | 0.756 |
SHG65653.1 | SHG65756.1 | SAMN04488116_1961 | SAMN04488116_1966 | Outer membrane protein. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.832 |
SHG65671.1 | SHG56752.1 | SAMN04488116_1962 | SAMN04488116_1801 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative ABC transport system ATP-binding protein. | 0.571 |
SHG65671.1 | SHG56975.1 | SAMN04488116_1962 | SAMN04488116_1813 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC-type lipoprotein export system, ATPase component. | 0.572 |
SHG65671.1 | SHG65653.1 | SAMN04488116_1962 | SAMN04488116_1961 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein. | 0.878 |
SHG65671.1 | SHG65690.1 | SAMN04488116_1962 | SAMN04488116_1963 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative ABC transport system permease protein. | 0.952 |
SHG65671.1 | SHG65715.1 | SAMN04488116_1962 | SAMN04488116_1964 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative ABC transport system permease protein. | 0.952 |
SHG65671.1 | SHG65731.1 | SAMN04488116_1962 | SAMN04488116_1965 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative ABC transport system ATP-binding protein. | 0.951 |
SHG65671.1 | SHG65756.1 | SAMN04488116_1962 | SAMN04488116_1966 | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.476 |
page 1 of 4