STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHG66555.1Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. (574 aa)    
Predicted Functional Partners:
SHG66509.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
  0.999
SHG66529.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
  0.999
SHG66574.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 0.999
SHG66487.1
Hypothetical protein.
 
 
 0.996
SHG66602.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
 
 
  0.989
SHG99709.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.924
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.828
SHG66217.1
Allosteric NADP-dependent malic enzyme.
    
 0.820
SHG66467.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.766
SHG22858.1
3-hydroxyacyl-CoA dehydrogenase.
     
  0.700
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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