STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHG66602.1Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit. (451 aa)    
Predicted Functional Partners:
SHG66574.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 0.998
SHG66509.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
   0.992
SHG66487.1
Hypothetical protein.
 
 
   0.990
SHG68406.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.990
SHG66555.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 
  0.989
SHG66529.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
 
   0.988
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.870
SHG66467.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.855
SHG16661.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.840
SHH06420.1
Glutamate synthase (ferredoxin).
     
  0.747
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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