STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG67357.1Hypothetical protein. (798 aa)    
Predicted Functional Partners:
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.598
asnS
asparaginyl-tRNA synthetase.
       0.591
SHG81765.1
Protein of unknown function.
  
 0.554
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.498
SHG67402.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
       0.478
SHG67428.1
Hypothetical protein.
       0.466
SHG54544.1
Membrane protein required for colicin V production.
 
     0.446
SHG77059.1
DnaJ like chaperone protein.
  
     0.445
SHG82470.1
CBS domain-containing protein.
  
     0.428
SHH06329.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.