STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG67516.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SHG67493.1
Biopolymer transport protein ExbD.
 
     0.810
SHG67472.1
Biopolymer transport protein ExbD.
 
     0.772
SHH10691.1
Hypothetical protein.
  
     0.738
SHG52679.1
Protein of unknown function.
  
     0.726
SHG51615.1
Hypothetical protein.
  
     0.714
SHG34069.1
Putative MetA-pathway of phenol degradation.
  
     0.698
SHG67539.1
Biopolymer transport protein ExbB.
       0.697
SHG22147.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.688
SHG88662.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.682
SHG33976.1
Hypothetical protein.
  
     0.680
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.