STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG68451.1Uncharacterized membrane protein YkgB. (148 aa)    
Predicted Functional Partners:
SHG68476.1
Cu+-exporting ATPase.
       0.773
SHG68406.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
       0.581
SHG68427.1
Cytochrome oxidase maturation protein, cbb3-type.
       0.581
SHG68354.1
Cytochrome c oxidase cbb3-type subunit 3; Manually curated.
       0.570
SHG68378.1
Hypothetical protein.
       0.570
SHG68498.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.537
SHG68334.1
Cytochrome c oxidase accessory protein FixG.
       0.435
SHG68284.1
Hypothetical protein.
       0.405
SHG68311.1
FixH protein.
       0.405
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.