STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG68498.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (229 aa)    
Predicted Functional Partners:
SHH06420.1
Glutamate synthase (ferredoxin).
    
 0.814
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.804
SHG22069.1
Signal transduction histidine kinase.
  
 0.792
SHG68476.1
Cu+-exporting ATPase.
 
     0.741
SHG68406.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.653
SHG68354.1
Cytochrome c oxidase cbb3-type subunit 3; Manually curated.
 
     0.624
SHG31994.1
Hypothetical protein.
   
 0.616
SHG68311.1
FixH protein.
 
    0.598
SHG49701.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.574
SHG68520.1
Nucleotide-binding universal stress protein, UspA family.
  
    0.553
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.