STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG69388.1Glycosyltransferase involved in cell wall bisynthesis. (385 aa)    
Predicted Functional Partners:
SHG69406.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
  0.948
SHG69361.1
Glycosyl transferases group 1.
 
     0.909
SHG69323.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
  0.906
SHG69559.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.891
SHG69342.1
Acetyltransferase (isoleucine patch superfamily).
 
    0.886
SHG69537.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.885
SHG69494.1
Hypothetical protein.
    0.882
SHG69517.1
Hypothetical protein.
 
 
  0.880
SHG69472.1
LruC domain-containing protein.
 
     0.877
SHG69454.1
UDPglucose 6-dehydrogenase.
  
    0.834
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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