Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG69581.1 | SHG69596.1 | SAMN04488116_2138 | SAMN04488116_2139 | Outer membrane efflux protein. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.785 |
SHG69581.1 | SHG69616.1 | SAMN04488116_2138 | SAMN04488116_2140 | Outer membrane efflux protein. | Response regulator receiver domain-containing protein. | 0.797 |
SHG69581.1 | SHG69635.1 | SAMN04488116_2138 | SAMN04488116_2141 | Outer membrane efflux protein. | Glycosyl transferase family 2. | 0.425 |
SHG69581.1 | SHG69654.1 | SAMN04488116_2138 | SAMN04488116_2142 | Outer membrane efflux protein. | STAS domain-containing protein. | 0.400 |
SHG69596.1 | SHG69581.1 | SAMN04488116_2139 | SAMN04488116_2138 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Outer membrane efflux protein. | 0.785 |
SHG69596.1 | SHG69616.1 | SAMN04488116_2139 | SAMN04488116_2140 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Response regulator receiver domain-containing protein. | 0.841 |
SHG69596.1 | SHG69635.1 | SAMN04488116_2139 | SAMN04488116_2141 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Glycosyl transferase family 2. | 0.552 |
SHG69596.1 | SHG69654.1 | SAMN04488116_2139 | SAMN04488116_2142 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | STAS domain-containing protein. | 0.400 |
SHG69616.1 | SHG69581.1 | SAMN04488116_2140 | SAMN04488116_2138 | Response regulator receiver domain-containing protein. | Outer membrane efflux protein. | 0.797 |
SHG69616.1 | SHG69596.1 | SAMN04488116_2140 | SAMN04488116_2139 | Response regulator receiver domain-containing protein. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.841 |
SHG69616.1 | SHG69635.1 | SAMN04488116_2140 | SAMN04488116_2141 | Response regulator receiver domain-containing protein. | Glycosyl transferase family 2. | 0.425 |
SHG69616.1 | SHG69654.1 | SAMN04488116_2140 | SAMN04488116_2142 | Response regulator receiver domain-containing protein. | STAS domain-containing protein. | 0.400 |
SHG69616.1 | SHG69696.1 | SAMN04488116_2140 | SAMN04488116_2144 | Response regulator receiver domain-containing protein. | HPt (histidine-containing phosphotransfer) domain-containing protein. | 0.429 |
SHG69616.1 | SHG69717.1 | SAMN04488116_2140 | SAMN04488116_2145 | Response regulator receiver domain-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.900 |
SHG69616.1 | SHG69740.1 | SAMN04488116_2140 | SAMN04488116_2146 | Response regulator receiver domain-containing protein. | Uncharacterized conserved protein, contains FIST_N domain. | 0.549 |
SHG69616.1 | SHG69757.1 | SAMN04488116_2140 | SAMN04488116_2147 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.919 |
SHG69616.1 | SHG69780.1 | SAMN04488116_2140 | SAMN04488116_2148 | Response regulator receiver domain-containing protein. | Haem-NO-binding. | 0.408 |
SHG69635.1 | SHG69581.1 | SAMN04488116_2141 | SAMN04488116_2138 | Glycosyl transferase family 2. | Outer membrane efflux protein. | 0.425 |
SHG69635.1 | SHG69596.1 | SAMN04488116_2141 | SAMN04488116_2139 | Glycosyl transferase family 2. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.552 |
SHG69635.1 | SHG69616.1 | SAMN04488116_2141 | SAMN04488116_2140 | Glycosyl transferase family 2. | Response regulator receiver domain-containing protein. | 0.425 |
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