STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG69676.1Two component transcriptional regulator, LytTR family. (236 aa)    
Predicted Functional Partners:
SHG69696.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
 
     0.909
SHG69757.1
PAS domain S-box-containing protein.
 
     0.866
SHH08088.1
GAF domain-containing protein.
 
 
  0.855
SHG69780.1
Haem-NO-binding.
 
     0.839
SHG69717.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.834
SHG51900.1
Histidine kinase.
  
  0.824
SHG30275.1
Histidine kinase.
  
  0.822
SHG30294.1
Two component transcriptional regulator, LytTR family.
  
  
  0.814
SHG22316.1
Sensor histidine kinase, LytS/YehU family.
  
  0.808
SHG69740.1
Uncharacterized conserved protein, contains FIST_N domain.
 
     0.804
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.