STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG70314.1C-terminal region of aryl-sulfatase. (472 aa)    
Predicted Functional Partners:
SHG90080.1
Sulfatase modifying factor 1.
  
 
   0.730
SHG70626.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.726
SHG66719.1
Arylsulfatase A.
  
  
 
0.715
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
       0.506
SHG45174.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.505
SHG70346.1
DNA polymerase-3 subunit alpha.
       0.497
rimM
16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
       0.496
SHG46662.1
Gliding motility-associated lipoprotein GldK.
  
 
   0.486
SHG70251.1
Arylsulfatase.
 
    
0.473
SHH05883.1
Gliding motility-associated lipoprotein GldJ.
  
 
   0.448
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.